This is the documentation of the marbits HPC. Here you’ll find information on how to access marbits and run jobs there. This documentation is a good starting point, but all the real-time conversation is happening at our slack group (sign up!) and don’t forget to cite marbits in your scientific work.

This is the documentation of the marbits HPC. Here you’ll find information on how to access marbits and run jobs there. This documentation is a good starting point, but all the real-time conversation is happening at our slack group (sign up!) and don’t forget to cite marbits in your scientific work.

Contents

New users

New Marbits users start here!
Log in to marbits
Log in to marbits outside of the local CMIMA network.
biocluster users moving to marbits.

System overview

Hardware. Hardware description and specs.
File systems. Description of file systems and storage quotas.
Transferring files from your local computer to marbits.
Back-up of your data in marbits.

Working in marbits

Software environment. How to load apps.
Running jobs. How to submit jobs to Marbits.

FAQS

Most of the things you are wondering are in the FAQS